Package: plantTracker 1.1.0

plantTracker: Extract Demographic and Competition Data from Fine-Scale Maps

Extracts growth, survival, and local neighborhood density information from repeated, fine-scale maps of organism occurrence. Further information about this package can be found in our journal article, "plantTracker: An R package to translate maps of plant occurrence into demographic data" published in 2022 in Methods in Ecology and Evolution (Stears, et al., 2022) <doi:10.1111/2041-210X.13950>.

Authors:Alice Stears [aut, cre], Jared Studyvin [aut], David Atkins [aut]

plantTracker_1.1.0.tar.gz
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plantTracker_1.1.0.tgz(r-4.4-any)plantTracker_1.1.0.tgz(r-4.3-any)
plantTracker_1.1.0.tar.gz(r-4.5-noble)plantTracker_1.1.0.tar.gz(r-4.4-noble)
plantTracker_1.1.0.tgz(r-4.4-emscripten)plantTracker_1.1.0.tgz(r-4.3-emscripten)
plantTracker.pdf |plantTracker.html✨
plantTracker/json (API)

# Install 'plantTracker' in R:
install.packages('plantTracker', repos = c('https://aestears.r-universe.dev', 'https://cloud.r-project.org'))

Peer review:

Bug tracker:https://github.com/aestears/planttracker/issues

Datasets:
  • grasslandData - Chart Quadrat Dataset for grassland species in MT and AZ An example dataset that contains data from mapped plant chart quadrats. Each row is an observation of one plant.
  • grasslandInventory - A dataset indicating sampling years for the grasslandData example dataset

On CRAN:

demographyspatial

4.90 score 8 stars 8 scripts 175 downloads 9 exports 23 dependencies

Last updated 1 years agofrom:cf3950b630. Checks:OK: 7. Indexed: yes.

TargetResultDate
Doc / VignettesOKOct 29 2024
R-4.5-winOKOct 29 2024
R-4.5-linuxOKOct 29 2024
R-4.4-winOKOct 29 2024
R-4.4-macOKOct 29 2024
R-4.3-winOKOct 29 2024
R-4.3-macOKOct 29 2024

Exports:aggregateByGenetcheckDatdrawQuadMapgetBasalAreasgetLambdagetNeighborsgetRecruitsgroupByGenettrackSpp

Dependencies:classclassIntclicpp11DBIe1071glueigraphKernSmoothlatticelifecyclemagrittrMASSMatrixpkgconfigproxyRcpprlangs2sfunitsvctrswk

Suggested plantTracker Workflow

Rendered fromSuggested_plantTracker_Workflow.Rmdusingknitr::rmarkdownon Oct 29 2024.

Last update: 2022-11-01
Started: 2021-07-27

Using the plantTracker trackSpp() function

Rendered fromUsing_the_plantTracker_trackSpp_function.Rmdusingknitr::rmarkdownon Oct 29 2024.

Last update: 2023-07-07
Started: 2021-10-12